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1/64-finals
1/32-finals
Draw
2026/271/64-finals
| 2 | Lahte United | Tabasalu Ulasabat | |
| 3 | Johvi Phoenix | Elva III | 4 : 2 |
| 4 | Bye | Hell Hunt | |
| 5 | Saue Laagri | Viimsi Lovid | 6 : 0 |
| 6 | Bye | Harju JK Laagri U21 | |
| 7 | EstHam United | Bye | |
| 8 | Kose | Kummik | 8 : 0 |
| 9 | JK Poseidon | Bye | |
| 10 | Helm | Deliirium | 30 : 0 |
| 11 | Tallinna Wolves | Tabasalu | 0 : 10 |
| 12 | Jarva-Jaani | Elva | 0 : 4 |
| 13 | Kristiine | Bye | |
| 14 | Bye | Jogeva Wolves | |
| 15 | Tammeka | Bye | |
| 16 | Bye | Zealot Sporting | |
| 17 | Kohvile | Bye | |
| 18 | Bye | Rumori Calcio | |
| 19 | Arukula Vigri | Bye | |
| 20 | Bye | Raasiku Joker | |
| 21 | Viimsi JK | Bye | |
| 22 | Bye | Nomme Utd U19 | |
| 23 | Rumori Calcio II | Bye | |
| 24 | Bye | Tartu Welco | |
| 25 | TalTech | Bye | |
| 26 | Bye | Keila JK | |
| 27 | Harju JK Laagri | Bye | |
| 28 | Bye | Rae Spordikool | |
| 29 | Tartu Kalev | Paide III | 4 : 3 |
| 30 | Bye | Kuusalu Kalev | |
| 31 | Tammeka Tartu U19 | Bye | |
| 32 | Bye | Tallinna Kalev | |
| 33 | Tartu Helios | Bye | |
| 34 | Bye | Soccernet | |
| 35 | JK Arsenal | Tallinna Kalev U21 | 0 : 3 |
| 36 | Rakvere FC Freedom | Kena | 3 : 2 |
| 37 | Kuressaare | Bye | |
| 38 | Bye | Tartu Welco 2 | |
| 39 | Nomme Utd | Bye | |
| 40 | Bye | Raplamaa | |
| 41 | Narva | Vana Hea Puur | 10 : 0 |
| 42 | Bye | Flora U21 | |
| 43 | Flora U19 | Bye | |
| 44 | Bye | Pohja-Tallinna JK Volta | |
| 45 | Hiiumaa | Bye | |
| 46 | Bye | Tulevik | |
| 47 | Saku Sporting | Bye | |
| 48 | Bye | Legion | |
| 49 | Marjamaa Kompanii | Bye | |
| 50 | Bye | Generation Tallinn | |
| 51 | TransferWise | Bye | |
| 52 | Bye | Olympic Tallinn | |
| 53 | FC Tallinn | Bye | |
| 54 | Bye | Tallinna FC Zapoos |
1/32-finals
| 1 | Bye | TBD #2 | |
| 2 | Johvi Phoenix | Hell Hunt | |
| 3 | Saue Laagri | Harju JK Laagri U21 | |
| 4 | EstHam United | Kose | |
| 5 | JK Poseidon | Helm | |
| 6 | TBD #11 | TBD #12 | |
| 7 | Kristiine | Jogeva Wolves | |
| 8 | Tammeka | Zealot Sporting | |
| 9 | Kohvile | Rumori Calcio | |
| 10 | Arukula Vigri | Raasiku Joker | |
| 11 | Viimsi JK | Nomme Utd U19 | |
| 12 | Rumori Calcio II | Tartu Welco | |
| 13 | TalTech | Keila JK | |
| 14 | Harju JK Laagri | Rae Spordikool | |
| 15 | Tartu Kalev | Kuusalu Kalev | |
| 16 | Tammeka Tartu U19 | Tallinna Kalev | |
| 17 | Tartu Helios | Soccernet | |
| 18 | Tallinna Kalev U21 | Rakvere FC Freedom | |
| 19 | Kuressaare | Tartu Welco 2 | |
| 20 | Nomme Utd | Raplamaa | |
| 21 | Narva | Flora U21 | |
| 22 | Flora U19 | Pohja-Tallinna JK Volta | |
| 23 | Hiiumaa | Tulevik | |
| 24 | Saku Sporting | Legion | |
| 25 | Marjamaa Kompanii | Generation Tallinn | |
| 26 | TransferWise | Olympic Tallinn | |
| 27 | FC Tallinn | Tallinna FC Zapoos |
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